Last Posted: Apr 11, 2024
- Comparison of metagenomic and traditional methods for diagnosis of E. coli enteric infections.
C Royer et al. mBio 2024 3 (4) e0342223 - Generalizability of machine learning in predicting antimicrobial resistance in E. coli: a multi-country case study in Africa.
Mike Nsubuga et al. BMC Genomics 2024 3 (1) 287 - Molecular screening of Entamoeba spp. (E. histolytica, E. dispar, E. coli, and E. hartmanni) and Giardia intestinalis using PCR and sequencing.
M Tokoro et al. MethodsX 2023 9 102361 - Study highlights resistance genes in shiga toxin-producing E coli
Dall C. CIDRAP, Aug 7, 2023. - Surveillance of antimicrobial resistant Shiga toxin-producing E. coli O157:H7 in England, 2016-2020.
David R Greig et al. J Antimicrob Chemother 2023 8 - Escherichia coli ST2797 Is Abundant in Wastewater and Might Be a Novel Emerging Extended-Spectrum Beta-Lactamase E. coli.
Erik Paulshus et al. Microbiol Spectr 2023 6 e0448622 - The role of plasmids in carbapenem resistant E. coli in Alameda County, California.
Nikolina Walas et al. BMC Microbiol 2023 5 (1) 147 - Europe notes increase in NDM-5 E coli, an expanding superbug
Wappes J. CIDRAP, May 12, 2023. - Genomic diversity of non-diarrheagenic fecal Escherichia coli from children in sub-Saharan Africa and south Asia and their relatedness to diarrheagenic E. coli.
Tracy H Hazen et al. Nature communications 2023 3 (1) 1400 - A one-year genomic investigation of Escherichia coli epidemiology and nosocomial spread at a large US healthcare network
EG Mills et al, Genome Medicine, December 30, 2022 - Mode of delivery modulates the intestinal microbiota and impacts the response to vaccination.
de Koff Emma M et al. Nature communications 2022 11 (1) 6638 - Genomic analysis of plasmid content in food isolates of E. coli, strongly supports its role as a reservoir for virulence and antibiotic resistance genes.
Balbuena-Alonso María G et al. Plasmid 2022 9 102650 - Application of a novel lytic phage vB_EcoM_SQ17 for the biocontrol of Enterohemorrhagic Escherichia coli O157:H7 and Enterotoxigenic E. coli in food matrices.
Zhou Yan et al. Frontiers in microbiology 2022 8 929005 - Evaluation of a simple, rapid and field-adapted diagnostic assay for enterotoxigenic E. coli and Shigella.
Connor Sean et al. PLoS neglected tropical diseases 2022 2 (2) e0010192 - Development of a simple, rapid, and sensitive diagnostic assay for enterotoxigenic E. coli and Shigella spp applicable to endemic countries.
Chakraborty Subhra et al. PLoS neglected tropical diseases 2022 1 (1) e0010180 - Direct antimicrobial resistance prediction from clinical MALDI-TOF mass spectra using machine learning
C Weiss et al, Nature Medicine, January 10, 2022 - Culture-free biphasic approach for sensitive detection of E. coli O157:H7 from beef samples.
Mostafa Ariana et al. Biotechnology and bioengineering 2021 8 - The infant gut resistome is associated with E. coli and early-life exposures.
Lebeaux Rebecca M et al. BMC microbiology 2021 7 (1) 201 - ESBL and E. coli From Pig and Pig Farm Workers in Vietnam and Their Association With Mobile Genetic Elements
Hounmanou Yaovi Mahuton Gildas et al. Frontiers in microbiology 2021 3 629139 - High-throughput mapping of the phage resistance landscape in E. coli.
Mutalik Vivek K et al. PLoS biology 2020 Oct (10) e3000877
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Disclaimer: Articles listed in the Public Health Genomics and Precision Health Knowledge Base are selected by the CDC Office of Public Health Genomics to provide current awareness of the literature and news. Inclusion in the update does not necessarily represent the views of the Centers for Disease Control and Prevention nor does it imply endorsement of the article's methods or findings. CDC and DHHS assume no responsibility for the factual accuracy of the items presented. The selection, omission, or content of items does not imply any endorsement or other position taken by CDC or DHHS. Opinion, findings and conclusions expressed by the original authors of items included in the update, or persons quoted therein, are strictly their own and are in no way meant to represent the opinion or views of CDC or DHHS. References to publications, news sources, and non-CDC Websites are provided solely for informational purposes and do not imply endorsement by CDC or DHHS.